SECURITIES AND EXCHANGE COMMISSION
Washington, D.C.  20549
 
FORM 8-K
 
CURRENT REPORT
PURSUANT TO SECTION 13 OR 15(d) OF THE
SECURITIES EXCHANGE ACT OF 1934
 
Date of report (Date of earliest event reported):  February 24, 2022
 
IONIS PHARMACEUTICALS, INC.
(Exact Name of Registrant as Specified in Charter)
 
Delaware
(State or Other Jurisdiction of Incorporation)
 
000-19125
 
33-0336973
(Commission File No.)
 
(IRS Employer Identification No.)

2855 Gazelle Court
Carlsbad, CA 92010
(Address of Principal Executive Offices and Zip Code)
 
Registrant’s telephone number, including area code: (760) 931-9200



Check the appropriate box below if the Form 8-K filing is intended to simultaneously satisfy the filing obligation of the registrant under any of the following provisions:


Written communications pursuant to Rule 425 under the Securities Act (17 CFR 230.425)


Soliciting material pursuant to Rule 14a-12 under the Exchange Act (17 CFR 240.14a-12)


Pre-commencement communications pursuant to Rule 14d-2(b) under the Exchange Act (17 CFR 240.14d-2(b))


Pre-commencement communications pursuant to Rule 13e-4(c) under the Exchange Act (17 CFR 240.13e-4(c))
 
Securities registered pursuant to Section 12(b) of the Act:

Title of each class
 
Trading symbol
 
Name of each exchange on which registered
Common Stock, $.001 Par Value  
“IONS”
 
The Nasdaq Stock Market, LLC
 
Indicate by check mark whether the registrant is an emerging growth company as defined in Rule 405 of the Securities Act of 1933 (Section 230.405 of this chapter) or Rule 12b-2 of the Securities Exchange Act of 1934 (Section 240.12b-2 of this chapter).
  Emerging growth company             
 
If an emerging growth company, indicate by check mark if the registrant has elected not to use the extended transition period for complying with any new or revised financial accounting standards provided pursuant to Section 13(a) of the Exchange Act.                                                                                                                     
 


Item 2.02
Results of Operations and Financial Condition.
 
On February 24, 2022, Ionis Pharmaceuticals, Inc. (the “Company”) issued a press release announcing the Company’s financial results for the quarter and fiscal year ended December 31, 2021.  In addition to disclosing results that are determined in accordance with Generally Accepted Accounting Principles (“GAAP”), the Company also discloses pro forma or non-GAAP results of operations, which are adjusted from GAAP to exclude non-cash compensation expense related to equity awards, costs related to the Company’s merger transaction with Akcea Therapeutics, Inc. (“Akcea”), and costs related to the Company’s restructured commercial operations and the related tax effects. The Company is presenting pro forma information excluding non-cash compensation expense related to equity awards, costs related to the Akcea merger, and costs related to the restructured commercial operations and related tax effects because the Company believes it is useful for investors in assessing the Company’s operating results compared to the prior year.  A copy of the release is furnished with this report as an exhibit pursuant to “Item 2.02. Results of Operations and Financial Condition” of Form 8-K in accordance with SEC Release Nos. 33-8216 and 34-47583.
 
The information in this Current Report on Form 8-K and the Exhibit attached hereto shall not be deemed “filed” for purposes of Section 18 of the Securities Exchange Act of 1934 (the “Exchange Act”) or otherwise subject to the liabilities of that section, nor shall it be deemed incorporated by reference in any filing under the Securities Act of 1933 or the Exchange Act, regardless of any general incorporation language in such filing.
 
Item 9.01.
Financial Statements and Exhibits.
 
(d) Exhibits.
 
Exhibit No.
Description
Press Release dated February 24, 2022.
   
104
Cover Page Interactive Data File (embedded within the Inline XBRL document).


SIGNATURE
 
Pursuant to the requirements of the Securities Exchange Act of 1934, as amended, the registrant has duly caused this report to be signed on its behalf by the undersigned, thereunto duly authorized.
 
 
Ionis Pharmaceuticals, Inc.
   
Dated:  February 24, 2022
By:
/s/ Patrick R. O’Neil
 
   
Patrick R. O’Neil
   
Chief Legal Officer and General Counsel




Exhibit 99.1


Ionis reports fourth quarter and full year 2021 financial results and recent business achievements

Exceeded 2021 financial guidance with revenues of more than $800 million
 
Webcast today, February 24, 2022, at 11:30 a.m. Eastern Time
 
CARLSBAD, Calif., February 24, 2022 – Ionis Pharmaceuticals, Inc. (Nasdaq: IONS) today reported financial results for the fourth quarter and full year ended December 31, 2021, and recent business achievements.
 
“During 2021, we made significant progress towards achieving our vision of becoming a leading fully-integrated biotechnology company. We advanced our commercial strategy and go-to-market plans for our near-term commercial opportunities, eplontersen, olezarsen and donidalorsen. Our collaboration with AstraZeneca to jointly develop and commercialize eplontersen enables us to potentially maximize benefit for patients, bolster our commercial organization and accelerate preparations for our near-term product launches. Most recently, we initiated Phase 3 studies with olezarsen in patients with severely high triglycerides and donidalorsen in patients with hereditary angioedema. This expands our Phase 3 pipeline to six medicines addressing eight indications. We also advanced our technology, positioning us to build on our leadership in RNA-targeted therapeutics and add value for our future medicines,” said Brett P. Monia, Ph.D., chief executive officer of Ionis. “We look forward to a steady cadence of catalysts throughout this year, highlighted by eplontersen Phase 3 data in patients with hATTR polyneuropathy planned for mid-year. We expect to file for regulatory approval for eplontersen before year end, assuming positive data. We also expect to make continued advancements to expand and diversify our technology. Based on our anticipated near- and mid-term catalysts, we believe we are well positioned to drive increasing value for patients and shareholders.”
 
2021 Summary Financial Results
 

Exceeded 2021 financial guidance

o
$810 million in total revenues

o
$695 million of operating expenses on a non-GAAP basis(1) and $840 million on a GAAP basis

o
Net income of $116 million on a non-GAAP basis(1) and a net loss of $29 million on a GAAP basis


Well capitalized with cash and short-term investments of $2.1 billion at year-end, enabling accelerating investments in 2022 with the goal to drive substantial future growth

Recent Marketed Products Highlights
 

SPINRAZA®: the global market leader for the treatment of spinal muscular atrophy (SMA) patients of all ages

o
$1.9 billion in worldwide SPINRAZA sales in 2021

o
More than 11,000 patients worldwide on therapy at the end of 2021 across commercial, expanded access and clinical trial settings

o
Biogen continued to expand upon SPINRAZA’s competitive profile through the ongoing ASCEND, RESPOND and DEVOTE studies
 

TEGSEDI® and WAYLIVRA®: important medicines approved for the treatment of patients with hereditary TTR amyloidosis with polyneuropathy and familial chylomicronemia syndrome, respectively

o
TEGSEDI and WAYLIVRA achieved innovative drug pricing in Brazil

o
WAYLIVRA is under review in Brazil for the treatment of familial partial lipodystrophy (FPL). If approved, WAYLIVRA will be the first approved treatment for patients with FPL in Brazil
 
1

Fourth Quarter 2021 and Recent Events
 

Advancing Ionis’ near-term commercial opportunities toward the market

o
Eplontersen: potential to change the standard-of-care for patients with TTR amyloidosis (ATTR)

Initiated a collaboration with AstraZeneca to jointly develop and commercialize eplontersen valued at up to $3.6 billion in an upfront and potential milestone payments, plus cost-sharing and royalties

The U.S. FDA granted orphan drug designation to eplontersen for the treatment of patients with ATTR

o
Olezarsen: potential first-in-class treatment for patients with elevated triglycerides

Initiated the Phase 3 CORE study of olezarsen in patients with severe hypertriglyceridemia (SHTG) with data expected in 2024

Reported positive data from the Phase 2 study of olezarsen in patients with moderate hypertriglyceridemia and at high risk for or with established cardiovascular disease in the European Heart Journal

o
Donidalorsen: potential best-in-class prophylactic treatment for patients with hereditary angioedema (HAE)

Initiated the Phase 3 OASIS-HAE study of donidalorsen in patients with HAE with data expected in 2024

Presented positive data from the Phase 2 study of donidalorsen in patients with HAE at the ACAAI annual scientific meeting
 

Advancing Ionis’ leading cardiovascular disease franchise

o
AstraZeneca presented new data from the Phase 1 multiple ascending dose study of ION449 (AZD8233) targeting PCSK9 in statin treated subjects with dyslipidemia at the AHA scientific sessions
 

Addressing substantial unmet medical needs with Ionis’ broad neurological disease franchise

o
Biogen licensed ION306 (BIIB115) for the treatment of SMA with the potential for extended dosing intervals, resulting in a $60 million payment from Biogen

o
Biogen reported that while the Phase 3 VALOR study of tofersen in patients with SOD1-ALS did not meet the primary endpoint, signs of reduced disease progression across multiple secondary and exploratory endpoints were observed. Biogen continues to engage with regulators to discuss a path forward for tofersen

o
Roche announced plans to initiate a new Phase 2 study of tominersen in patients with Huntington’s disease based on new findings from a post-hoc analysis of the Phase 3 GENERATION-HD1 study

o
Initiated the Phase 1/2 HALOS study of ION582 (BIIB121) in patients with Angelman syndrome, resulting in a $10 million payment from Biogen

o
Advanced three neurological disease programs, resulting in $23 million in payments from Biogen

o
Dynacure advanced IONIS-DNM2-2.5Rx, resulting in $7.5 million in payments from Dynacure
 

Advancing additional programs in Ionis’ clinical pipeline for diseases with unmet medical need

o
Initiated a Phase 2 study of sapablursen (formerly known as IONIS-TMPRSS6-LRx) in patients with polycythemia vera, the second indication for sapablursen

o
Reported topline results from the Phase 2 study of cimdelirsen (formerly known as IONIS-GHR-LRx) in patients with uncontrolled acromegaly, achieving proof of mechanism with a strong indication of proof of concept

o
Advanced two metabolic disease programs, resulting in $40 million in payments from AstraZeneca
 
2

2022 Pipeline Milestones(2)

Anticipated 2022 Regulatory Filings
Program
Anticipated Indication
H1
H2
Eplontersen
hATTR polyneuropathy
 
 
Anticipated Key 2022 Data Readouts
Program
Data Readout
Anticipated Indication
H1
H2
Tominersen
Phase 3 post hoc
Huntington’s disease
 
Eplontersen
Phase 3
hATTR polyneuropathy
  •
ION449 (PCSK9)
Phase 2b
Cardiovascular disease
 
Donidalorsen
Phase 2
HAE
 
IONIS-C9Rx (BIIB078)
Phase 2
C9-ALS
 
IONIS-AGT-LRx
Phase 2b
Treatment-resistant hypertension
 
Fesomersen (FXI)
Phase 2b
Thrombosis
 
Bepirovirsen (HBV)
Phase 2b
Hepatitis B virus infection
 
Donidalorsen
Phase 2 OLE
HAE
 
Cimdelirsen
Phase 2
Acromegaly (monotherapy)
 
 
Anticipated Key 2022 Study Initiations
Program
Phase
Anticipated Indication
H1
H2
Sapablursen
2
Polycythemia vera
 
IONIS-MAPTRx (BIIB080)
2
Alzheimer’s disease
 
ION904 (AGT)
2
Uncontrolled hypertension
 
ION717 (PRNP)
1/2
Prion disease
 
 
Anticipated Key 2022 Technology Advancements
Program
Anticipated Advancement
H1
H2
SMA
Advance follow-on program
 
Muscle LICA
Advance into preclinical development (IND-supporting)
 
MsPA Backbone
Advance into preclinical development (IND-supporting)
 

= achieved      • = planned

2021 Financial Results and 2022 Financial Guidance

“Over the last year, we achieved numerous pipeline and technology milestones, advanced multiple medicines towards the market and accelerated preparations for our near-term commercial launches. We also exceeded our 2021 financial guidance, driven by revenue from advancing multiple partnered programs and by strengthening and streamlining our business,” said Elizabeth L. Hougen, chief financial officer of Ionis. “We have a long history of financial responsibility that provides us with a strong financial foundation. With more than $2 billion of cash and a substantial and sustainable base of commercial and R&D revenues, we are well positioned to accelerate our investments in 2022 to drive substantial future growth.”

2022 Financial Guidance

Ionis’ full year 2022 financial guidance consists of the following components (on a non-GAAP basis)(1):

3

Guidance
 
Revenue
>$575 million
   
Operating Expenses (1)
$825 million to $850 million
   
Net Loss (1)
<$275 million
   
Cash and Short-Term Investments
~$1.7 billion
   


(1)
All non-GAAP amounts referred to in this press release exclude non-cash compensation expense related to equity awards. In 2021 and 2020 all non-GAAP amounts also excluded expenses related to the Akcea Merger and restructured commercial operations and the related tax effects. Please refer to the section below titled “Financial Impacts of Akcea Merger and Restructured Commercial Operations” for a summary of the costs specific to these transactions. Additionally, please refer to the detailed reconciliation of non-GAAP and GAAP measures, which is provided later in this press release.
 

(2)
Partnered program milestones are based on partners’ most recent publicly available disclosures.

Revenue
 
Ionis’ revenue was comprised of the following (amounts in millions):
 
     
Three months ended
December 31,
     
Year ended
December 31,
 
 
   
2021
   
2020
   
2021
   
2020
 
Revenue:
                 
Commercial revenue:
                       
SPINRAZA royalties
 
$
69
   
$
75
   
$
268
   
$
287
 
TEGSEDI and WAYLIVRA revenue, net
   
9
     
19
     
56
     
70
 
Licensing and royalty revenue
   
9
     
2
     
18
     
8
 
Total commercial revenue
   
87
     
96
     
342
     
365
 
R&D revenue:
                               
Amortization from upfront payments
   
21
     
12
     
78
     
80
 
Milestone payments
   
40
     
110
     
88
     
183
 
License fees
   
290
     
71
     
291
     
86
 
Other services
   
2
     
1
     
11
     
15
 
Total R&D revenue
   
353
     
194
     
468
     
364
 
Total revenue
 
$
440
   
$
290
   
$
810
   
$
729
 

The Company’s revenue increased by more than 10 percent compared to 2020 driven in large part by significant partner payments across multiple partnered programs. In 2021, the Company earned $200 million from its new collaboration with AstraZeneca to jointly develop and commercialize eplontersen. The Company also earned more than $160 million from Biogen for advancing several neurology disease programs.
 
The Company successfully completed the transition of its TEGSEDI and WAYLIVRA operations in the EU and North America to Sobi in the first and second quarters of 2021, respectively. The decrease in TEGSEDI and WAYLIVRA revenue in 2021 compared to 2020 was due to the shift from product sales to distribution fees based on net sales generated by Sobi. As part of the transition, Ionis restructured its commercial operations resulting in substantial cost savings.

4

Operating Expenses
 
Ionis is advancing a large late-stage pipeline and as a result, its non-GAAP operating expenses increased in 2021 compared to 2020. Higher R&D expenses were driven by the expanded number of Phase 3 studies the Company was conducting, which doubled over the course of 2021 from 3 to 6 studies. Additionally, the Company recognized $35 million in R&D expense in the third quarter of 2021 for licensing Bicycle Therapeutic’s technology. Lower SG&A expenses primarily reflected operating efficiencies achieved from integrating Akcea and restructuring the Company’s commercial operations.

Net Loss Attributable to Ionis Common Stockholders

Net loss attributable to Ionis’ common stockholders in 2021 decreased compared to 2020 for the reasons discussed above. Also contributing to the decrease in Ionis’ net loss in 2021 compared to 2020 was the non-cash adjustment of the valuation allowance Ionis recorded against its federal net deferred tax assets in 2020.

Balance Sheet

As of December 31, 2021, Ionis had cash, cash equivalents and short-term investments of $2.1 billion, compared with $1.9 billion as of December 31, 2020.

The Company revised its 2020 amounts to reflect the simplified convertible instruments guidance the Company adopted retrospectively on January 1, 2021.

Webcast

Ionis will conduct a webcast today at 11:30 a.m. Eastern time to discuss this announcement and related activities. Interested parties may access the webcast here. A webcast replay will be available for a limited time at the same address.

About Ionis Pharmaceuticals, Inc.
 
For more than 30 years, Ionis has been the leader in RNA-targeted therapy, pioneering new markets and changing the standards of care with its novel antisense technology. Ionis currently has three marketed medicines and a premier late-stage pipeline highlighted by industry leading cardiovascular and neurological franchises. Our scientific innovation began and continues with the knowledge that sick people depend on us, which fuels our vision of becoming a leading, fully-integrated biotechnology company.

To learn more about Ionis visit www.ionispharma.com or follow us on Twitter @ionispharma.

Ionis’ Forward-looking Statement
 
This press release includes forward-looking statements regarding Ionis’ business, financial guidance and the therapeutic and commercial potential of SPINRAZA (nusinersen), TEGSEDI (inotersen), WAYLIVRA (volanesorsen), eplontersen, olezarsen, donidalorsen, ION363, pelacarsen, tofersen, Ionis’ technologies and Ionis’ other products in development. Any statement describing Ionis’ goals, expectations, financial or other projections, intentions or beliefs is a forward-looking statement and should be considered an at-risk statement. Such statements are subject to certain risks and uncertainties, including those related to the impact COVID-19 could have on our business, and including those inherent in the process of discovering, developing and commercializing medicines that are safe and effective for use as human therapeutics, and in the endeavor of building a business around such medicines. Ionis’ forward-looking statements also involve assumptions that, if they never materialize or prove correct, could cause its results to differ materially from those expressed or implied by such forward-looking statements. Although Ionis’ forward-looking statements reflect the good faith judgment of its management, these statements are based only on facts and factors currently known by Ionis. As a result, you are cautioned not to rely on these forward-looking statements. These and other risks concerning Ionis’ programs are described in additional detail in Ionis’ annual report on Form 10-K for the year ended December 31, 2020, and the most recent Form 10-Q quarterly filing, which are on file with the SEC. Copies of these and other documents are available from the Company.

In this press release, unless the context requires otherwise, “Ionis,” “Company,” “we,” “our” and “us” all refer to Ionis Pharmaceuticals and its subsidiaries.

Ionis Pharmaceuticals® is a registered trademark of Ionis Pharmaceuticals, Inc. Akcea Therapeutics® is a registered trademark of Akcea Therapeutics, Inc. TEGSEDI® is a registered trademark of Akcea Therapeutics, Inc. WAYLIVRA® is a registered trademark of Akcea Therapeutics, Inc. SPINRAZA® is a registered trademark of Biogen.

Ionis Pharmaceuticals Investor Contact:
760-603-2331

Ionis Pharmaceuticals Media Contact:
760-603-2681

5

IONIS PHARMACEUTICALS, INC.
SELECTED FINANCIAL INFORMATION
Condensed Consolidated Statements of Operations
(In Millions, Except Per Share Data)

     
Three months ended,
December 31,
     
Year ended
December 31,
  
   
2021
   
2020
   
2021
   
2020
 
   
(as revised*)
         
(as revised*)
 
   
(unaudited)
             
Revenue:
                       
Commercial revenue:
                       
SPINRAZA royalties
 
$
69
   
$
75
   
$
268
   
$
287
 
TEGSEDI and WAYLIVRA revenue, net
   
9
     
19
     
56
     
70
 
Licensing and royalty revenue
   
9
     
2
     
18
     
8
 
Total commercial revenue
   
87
     
96
     
342
     
365
 
Research and development revenue under collaborative agreements
   
353
     
194
     
468
     
364
 
Total revenue
   
440
     
290
     
810
     
729
 
Expenses:
                               
Cost of sales
   
2
     
3
     
11
     
12
 
Research, development and patent
   
179
     
171
     
643
     
535
 
Selling, general and administrative
   
38
     
139
     
186
     
354
 
Total operating expenses
   
219
     
313
     
840
     
901
 
Income (loss) from operations
   
221
     
(23
)
   
(30
)
   
(172
)
                                 
Other income (expense):
                               
Loss on early retirement of debt
   
-
     
-
     
(9
)
   
-
 
Other income, net
   
4
     
8
     
9
     
37
 
Income (loss) before income tax benefit (expense)
   
225
     
(15
)
   
(30
)
   
(135
)
                                 
Income tax benefit (expense)
   
-
     
(341
)
   
1
     
(345
)
                                 
Net income (loss)
 
$
225
   
(356
)
 
(29
)
 
(480
)
Net loss attributable to noncontrolling interest in Akcea Therapeutics, Inc.
   
-
     
1
     
-
     
36
 
Net income (loss) attributable to Ionis Pharmaceuticals, Inc. common stockholders
 
$
225
   
(355
)
 
(29
)
 
(444
)
                                 
Basic net income (loss) per share
 
$
1.59
   
(2.54
)
 
(0.20
)
 
(3.18
)
Diluted net income (loss) per share
 
$
1.41
   
(2.54
)
 
(0.20
)
 
(3.18
)
Shares used in computing basic net income (loss) per share
   
141
     
140
     
141
     
140
 
Shares used in computing diluted net income (loss) per share
   
160
     
140
     
141
     
140
 

*The Company revised its 2020 amounts to reflect the simplified convertible instruments guidance the Company adopted retrospectively on January 1, 2021.
 
6

IONIS PHARMACEUTICALS, INC.
Reconciliation of GAAP to Non-GAAP Basis:
Condensed Consolidated Operating Expenses, Income (Loss) From Operations, and Net Income (Loss)
(In Millions)

   
Three months ended
December 31,
   
Year ended
December 31,
 
   
2021
   
2020
   
2021
   
2020
 
         
(as revised*)
         
(as revised*)
 
   
(unaudited)
             
As reported research, development and patent expenses according to GAAP
 
$
179
   
$
171
   
$
643
   
$
535
 
Excluding compensation expense related to equity awards
   
(16
)
   
(22
)
   
(88
)
   
(99
)
Excluding Akcea merger and restructured commercial operation costs**
   
(1
)
   
(26
)
   
(9
)
   
(26
)
                                 
Non-GAAP research, development and patent expenses
 
$
162
   
$
123
   
$
546
   
$
410
 
                                 
As reported selling, general and administrative expenses according to GAAP
 
$
38
   
$
139
   
$
186
   
$
354
 
Excluding compensation expense related to equity awards
   
(7
)
   
(15
)
   
(33
)
   
(72
)
Excluding Akcea merger and restructured commercial operation costs**
   
1
     
(64
)
   
(15
)
   
(64
)
                                 
Non-GAAP selling, general and administrative expenses
 
$
32
   
$
60
   
$
138
   
$
218
 
                                 
As reported operating expenses according to GAAP
 
$
219
   
$
313
   
$
840
   
$
901
 
Excluding compensation expense related to equity awards
   
(23
)
   
(36
)
   
(121
)
   
(171
)
Excluding Akcea merger and restructured commercial operation costs**
   
-
     
(90
)
   
(24
)
   
(90
)
                                 
Non-GAAP operating expenses
 
$
196
   
$
187
   
$
695
   
$
640
 
                                 
As reported income (loss) from operations according to GAAP
 
$
221
   
(23
)
 
(30
)
 
(172
)
Excluding compensation expense related to equity awards
   
(23
)
   
(36
)
   
(121
)
   
(171
)
Excluding Akcea merger and restructured commercial operation costs**
   
-
     
(90
)
   
(24
)
   
(90
)
                                 
Non-GAAP income from operations
 
$
244
   
$
103
   
$
115
   
$
89
 
                                 
As reported net income (loss) attributable to Ionis Pharmaceuticals, Inc. common stockholders according to GAAP
 
$
225
   
(355
)
 
(29
)
 
(444
)
Excluding compensation expense related to equity awards attributable to Ionis Pharmaceuticals, Inc. common stockholders
   
(23
)
   
(36
)
   
(121
)
   
(162
)
Excluding Akcea merger and restructured commercial operation costs**
   
-
     
(90
)
   
(24
)
   
(90
)
Income tax effect related to compensation expense related to equity awards attributable to Ionis Pharmaceuticals, Inc. common stockholders
   
-
     
(16
)
   
-
     
2
 
Income tax effect related to the Akcea merger and restructured commercial operation costs**
   
-
     
(340
)
   
-
     
(340
)
                                 
Non-GAAP net income (loss) attributable to Ionis Pharmaceuticals, Inc. common stockholders according to GAAP
 
$
248
   
$
127
   
$
116
   
$
146
 

*The Company revised its 2020 amounts to reflect the simplified convertible instruments guidance the Company adopted retrospectively on January 1, 2021.
 
7

** In October 2020, Ionis completed a merger transaction with Akcea such that following the completion of the merger Akcea became a wholly owned subsidiary of Ionis.  Additionally, in December 2020 and April 2021, Ionis restructured its European operations and its North American TEGSEDI operations, respectively, as a result of entering into distribution agreements with Sobi. The Company incurred $24 million and $90 million of costs in conjunction with the Akcea merger and restructuring of the Company’s commercial operations for 2021 and 2020, respectively. The Company excluded these costs from its non-GAAP amounts for those periods.
 
Reconciliation of GAAP to Non-GAAP Basis
 
As illustrated in the Selected Financial Information in this press release, non-GAAP operating expenses, non-GAAP income (loss) from operations, and non-GAAP net income (loss) attributable to Ionis Pharmaceuticals, Inc. common stockholders were adjusted from GAAP to exclude compensation expense related to equity awards and costs related to the Akcea merger and restructured commercial operations and the related tax effects. Compensation expense related to equity awards are non-cash. Costs related to the Akcea merger and restructured commercial operations include: severance costs, retention costs and other costs related to commercial operations. Ionis has regularly reported non-GAAP measures for operating results as non-GAAP results. These measures are provided as supplementary information and are not a substitute for financial measures calculated in accordance with GAAP. Ionis reports these non-GAAP results to better enable financial statement users to assess and compare its historical performance and project its future operating results and cash flows. Further, the presentation of Ionis’ non-GAAP results is consistent with how Ionis’ management internally evaluates the performance of its operations.
 
8

IONIS PHARMACEUTICALS, INC.
Condensed Consolidated Balance Sheets
(In Millions)

     
December 31,
2021
     
December 31,
2020
  
         
(as revised*)
 
Assets:
           
Cash, cash equivalents and short-term investments
 
$
2,115
   
$
1,892
 
Contracts receivable
   
62
     
76
 
Other current assets
   
168
     
162
 
Property, plant and equipment, net
   
178
     
181
 
Other assets
   
89
     
79
 
Total assets
 
$
2,612
   
$
2,390
 
                 
Liabilities and stockholders’ equity:
               
Other current liabilities
 
$
143
   
$
183
 
Current portion of 1% convertible senior notes, net
   
-
     
309
 
Current portion of deferred contract revenue
   
98
     
108
 
0% convertible senior notes, net
   
619
     
-
 
0.125% convertible senior notes, net
   
542
     
540
 
Long-term obligations, less current portion
   
86
     
83
 
Long-term deferred contract revenue
   
352
     
424
 
Total stockholders’ equity
   
772
     
743
 
Total liabilities and stockholders’ equity
 
$
2,612
   
$
2,390
 

*The Company revised its 2020 amounts to reflect the simplified convertible instruments guidance the Company adopted retrospectively on January 1, 2021.
 
#   #   #


9